GGEbiplot Pattern Explorer
Complete solution to biplot analysis, video game for scientists
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GGEbiplot functions
Functions for a 4-Way Dataset
Variable-by-Variable Biplot
Genotype by env. biplot
Genotype by trait biplot
QTL mapping biplot
QTL by environment biplot
Gene expression biplot
Diallel cross data biplot
Host by pathogen biplot
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Free User-friendly ANOVA
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Functions for a Diallel Cross Dataset
For a diallel cross data matrix, a single GGE biplot can help address the following questions visually: Rank the parents (as entries) based on combining ability with a particular tester; Show general combining ability (GCA) of the parents; Show specific combining ability (SCA) of the parents; Show the best mating partner (as an entry) for each parent (as a tester); Show heterotic groups; Show the best crosses; Show the best parents as tester; Formulate hypotheses on the genetics of the parents; and All the accessory functions listed for multi-environment trial data.
For a diallel cross data matrix, a single GGE biplot can help address the following questions visually:
Rank the parents (as entries) based on combining ability with a particular tester;
Show general combining ability (GCA) of the parents;
Show specific combining ability (SCA) of the parents;
Show the best mating partner (as an entry) for each parent (as a tester);
Show heterotic groups;
Show the best crosses;
Show the best parents as tester;
Formulate hypotheses on the genetics of the parents; and
All the accessory functions listed for multi-environment trial data.