GGEbiplot Pattern Explorer

Complete solution to biplot analysis, video game for scientists

Functionality

GGEbiplot functions

Functions for a 4-Way Dataset

Variable-by-Variable Biplot
Association Biplot

Genotype by env. biplot

Genotype by trait biplot

QTL mapping biplot

QTL by environment biplot

Gene expression biplot

Diallel cross data biplot

Host by pathogen biplot

3D-Biplot

Free User-friendly ANOVA

Breeder's Kit

 

 

Information 

Biplot Analysis Instructions

GGEbiplot Beta download

GGEbiplot License

Biplot Analysis Presentations

User's feedback

GGE biplot publications by users

GGE biplot publications

References on biplot analysis

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Publications using GGE Biplot methodology

2006

  • 胡新中　 罗勤贵　 欧阳韶晖　 郑建梅　 张国权. 2006.  裸燕麦酶活性抑制方法及品质比较. JOURNAL OF THE CHINESE CEREALS AND OILS ASSOCIATION  Vol.21 No.5 P.46-50

  • Ihsanullah, Ayub, M., Ashraf, M., Mirza, M.Y. and Ali, N. 2006. Graphical analysis of multi-environmental trial (MET) data in sunflower through clustering and GGE biplot technique. Pakistan J. Bot.

  • Juan Carlos Caffarel and Mohamed Mergoum. 2006. GGL Biplot Study of the Association Among Locations for Loaf Volume in Hard Red Spring Wheat Grown in North Dakota. ASA Annual conferences

  • Yüksel KAYA*, Mevlüt AKÇURA, Seyfi TANER. 2006. GGE-Biplot Analysis of Multi-Environment Yield Trials in Bread wheat. Turk J Agric For 30: http://journals.tubitak.gov.tr/havuz/tar-0604-6.pdf.

  • Samonte, S.O., Wilson, L.T., McClung, A.M., Tabien, R.E. . Selection for stable high income grossing rice genotypes. Rice Technical Working Group Meeting Proceedings, February 29 - March 1, 2006, Houston, TX.  CDROM.

  • Emmanuel Otooand Robert Asiedu. 2006. Cultivar evaluation and mega-environment investigation of D.cayenensis cultivars in Ghana based on the GGE biplot analysis. Journal of Food, Agriculture & Environment, Vol.4 (3&4): 162-166.

  • Sabu, K.K., Abdullah, M.Z., Lim, L.S., Wickneswari, R. 2006. Development and evaluation of advanced backcross families of rice for agronomically important traits. Commun. Biometry Crop Sci. 1 (2), 111-123.

  • Kaya, Y., Akcura, M., and Taner, S. 2006. GGE biplot analysis of multi-environmental yield trials in bread wheat (T. aestivum L.). Turkish Journal of Agriculture and Forestry. In press. (http://journals.tubitak.gov.tr/havuz/tar-0604-6.pdf)

  • Malik, R., Paynter, B., and Winfield, K. 2006. Evaluation of oat varieties for hay production in Western Australia. Proceedings of the 13th Australian Agronomy Conference, 10-14 September 2006, Perth, Western Australia. Australian Society of Agronomy. http://www.regional.org.au/au/asa/2006/poster/agronomy/4627_malikr.htm

  • Malik, R., Winfield, K. and Paynter, B. 2006. Agronomic performance of dwarf milling oats in Western Australian environments. Proceedings of the 13th Australian Agronomy Conference, 10-14 September 2006, Perth, Western Australia. Australian Society of Agronomy. http://www.regional.org.au/au/asa/2006/poster/agronomy/4833_malikr.htm

  • Cober, E. R., Fregeau-Reid, J. A., Butler, G., Voldeng, H. D.. 2006. Genotype-Environment Analysis of Parameters Describing Water Uptake in Natto Soybean. Crop Sci 2006 46: p. 2415-2419.

  • Galiana-Balaguer, L.; Rosell, S., Nuez, F. 2006. Characterization and Selection of Balanced Sources of Variability for Breeding Tomato (Lycopersicon) Internal Quality, Genetic Resources and Crop Evolution 53:907-923.

  • Kaya, Y., Akcura, M., Ayaranci, R., Taner, S. 2006. Pattern analysis environment trials in bread wheat. Commun. Biometry Crop Sci. 1 (1), 63-71.

  • Sterling B. Blanche, Gerald O. Myers, Jimmy Z. Zumba, David Caldwell, and James Hayes. 2006. Stability Comparisons Between Conventional And Near-isogenic Transgenic Cotton Cultivars. The Journal of Cotton Science 10:17-28. (http://www.cotton.org/journal/2006-10/1/upload/jcs10-017.pdf)

  • Dardanellia, J. L., M. Balzarinic, M. J. Martíneza, M. Cunibertib, S. Resnikd, Silvina F. Ramundaa, R. Herrerob, and H. Baigorrib. 2006. Soybean maturity groups, environments, and their interaction define mega-environments for seed composition in Argentina. Crop Sci. 46:1939-1947.

  • Yi Shang et al. 2006. GGE biplot analysis of diallel cross of Brasica napus L. Acta Agronomica SInica 32: 243-248 (In Chinese with English Abstract).

  • Diallel analysis based on GGE biplot: https://txspace.tamu.edu/bitstream/1969.1/3154/1/etd-tamu-2004C-PLBR-bhatnag.pdf

  • W.E. Thomason and S.B. Phillips. 2006. Methods to evaluate wheat cultivar testing environments and improve cultivar selection protocols. Field Crops Research, in Press.

  • González, A.M., A.B. Monteagudo, P.A. Casquero, A.M. De Ron, and M. Santalla. 2006. Genetic variation and environmental effects on agronomical and commercial quality traits in the main European market classes of dry bean. Field Crops Research 95:336-347

  • Blanche, S. B. and G. O. Myers. 2006. Identifying discriminating locations for cultivar selection in Louisiana. Crop Sci 46: 946-949.

  • de la Vega, A. J. and S. C. Chapman. 2006. Defining sunflower selection strategies for a highly heterogeneous target population of environments. Crop Sci 46: 136-144.

  • Luis Bertoia, César López, and Ruggero Burak. 2006. Biplot Analysis of Forage Combining Ability in Maize Landraces Crop Sci 46: 1346-1353.

  • Dehghani, H., A. Ebadi, and A. Yousefi. 2006. Biplot Analysis of genotype by environment interaction for barley yield in Iran.  Agron J 98: 388-393.

  • Navabi, A., Yang, R.-C., Helm, J., Spaner, D. M. 2006. Can spring wheat-growing megaenvironments in the northern Great Plains be dissected for representative locations or niche-adapted genotypes? Crop Sci 46:1107-1116

  • Blanche, S.B., Myers, G.O., Zumba, J.Z., Caldwell, D., and Hayes, J. 2006. Stability comparisons between conventional and near-isogenic transgenic cotton cultivars. Journal of Cotton Science 10:17-28.

  • Ibañez. M. A., M. E. Faricelli, N. C. Bonamico, M. G Balzarini, and M. A. Di Renzo. 2006. Biplot Analysis Of Lovegrass Hybrid Performances In The Semi-Arid Region Of Argentina. Journal of Crop Improvement 15: 121-131.

  • Kang, M.S., V. D. Aggarwal, and R. M. Chirwa, 2006.  Adaptability and stability of bean cultivars as determined via yield-stability statistic and GGE biplot analysis.  Journal of Crop Improvement 15: 97-120.

2005

  • Samonte S. O. P. B., L. T. Wilson, A. M. McClung, and J. C. Medley. 2005. Targeting cultivars onto rice growing environments using AMMI and SREG GGE biplot analyses. Crop Sci. 45: 2414-2424.

  • Onyeka, T. J., Ekpo, E. J. A. & Dixon, A. G. O. 2005. Virulence and Host–pathogen Interaction of Botryodiplodia theobromae Isolates of Cassava Root

  • Rot Disease. Journal of Phytopathology 153 (11-12), 726-729.

  • Al-Yassin, A., Grando, S., Kafawin, O., Tell, A. and Ceccarelli, S. 2005. Heritability estimates in contrasting environments as influenced by the adaptation level of barley germplasm. Annals of Applied Biology 147: 235-244.

  • Bhan, M.K. S. Pal, B.L. Rao, A.K Dhar, M.S. Kang, 2005. GGE biplot analysis of oil yield in lemongrass. Journal of New Seeds, 7:127-139.

  • Bhardwaj, H.L., P.F. Reese, Jr., M.S. Kang, M. Zhang, 2005. Soybean cultivar evaluation via GGE biplot analysis, J. New Seeds 7: 37-50.

  • Casanoves, F. , J. Baldessari, and M. Balzarini. 2005. Evaluation of multienvironment trials of peanut cultivars. Crop Sci 45: 18-26.

  • Duveiller, E., R. C. Sharma, D. Mercado, H. Maraite, M. R. Bhatta, G. Ortiz-Ferrara, and D. Sharma. 2005. Controlling foliar blight of wheat in south Asia: a holistic approach. Turk J Agric For 29:129-135.

  • Malvar, R. A., P. Revillaa, A. Butróna, B. Gouesnardc, A. Boyatc, P. Soengasa, A. Álvarezb, and A. Ordás. 2005. Performance of crosses among French and Spanish maize populations across environments. Crop Sci. 45: 1052-1057.

  • Morris, C. F., K. G. Campbell, and G. E. King. 2004. Characterization of the end-use quality of soft wheat cultivars from the eastern and western US germplasm "pools".  Plant Genetic Resources 2:59-69.

  • Ober, E. S., M.L. Bloa, C. J.A. Clark, A. Royal, K. W. Jaggard, and J. D. Pidgeon. 2005. Evaluation of physiological traits as indirect selection criteria for drought tolerance in sugar beet. Field Crops Research, 91: 231-249.

  • INTERACTION GENOTYPE × ENVIRONMENT IN THE CHARACTERIZATION OF RAINFED AREAS FOR WHEAT. J. Enrique Rodríguez-Pérez, Jaime Sahagún-Castellanos, Héctor E. Villase?or-Mir. Publicado como ENSAYO en Agrociencia 39: 51-64. 2005. http://www.colpos.mx/agrocien/Bimestral/2005/ene-feb/art-6.pdf.

  • Peterson, D. M., D. M. Wesenbergb, D. E. Burrupb and C. A. Ericksonb 2005. Relationships among agronomic traits and grain composition in oat genotypes grown in different environments. Crop Sci 45:1249-1255.

  • Voltas, J., H. López-Córcoles, and G. Borrás. 2005. Use of biplot analysis and factorial regression for the investigation of superior genotypes in multi-environment trials. Europ. J. Agronomy 22: 309–324.

  • 陕南优质油菜丰产栽培技术研究. 宋仁刚, 王道杰, 王宏, 张崇荣. ACTA AGRICULTURAE BOREALI-OCCIDENTALIS SINICA. 2005 Vol.14 No.1 P.158-161.

  • J. P. Murphy, R. A. Navarro, D. A. Van Sanford. 2005. UNIFORM SOUTHERN SOFT RED WINTER WHEAT FUSARIUM HEAD BLIGHT SCREENING NURSERY. 2004 NURSERY REPORT. http://www.scabusa.org/pdfs_dbupload/04_ussrww_fhb_report.pdf.

  • Dawn E. Fraser and Cynthia C. Green. 2005. Using GGE Biplot to Identify Ideal Test Sites for Evaluating Fiber Quality. Beltwide Cotton Conference, 2005.

  • Sterling Blanche and Gerald Myers.2005.  "Identifying Discriminating Locations for Cultivar Selection Using GGEbiplot." http://crops.confex.com/crops/2005am/techprogram/P4892.HTM.

  • Brooks Blanche, 2005. Using GGE Biplot to evaluate cotton variety stability and determine discriminating environments: http://www.agronomy.lsu.edu/calendar.asp.

2004

  • Rubio, J., J.I. Cubero, L.M. Martín, M.J. Suso, and F. Flores. 2004.  Biplot analysis of trait relations of white lupin in Spain. Euphytica 135: 217-224.

  • Sharma, R. C., E. Duveiller , F. Ahmed , B. Arun , D. Bhandari , M. R. Bhatta, R. Chand , P. C. P. Chaurasiya , D. B. Gharti , M. H. Hossain, A. K. Joshi , B. N. Mahto, P. K. Malaker , M. A. Reza, M. Rahman, M. A. Samad, M. A. Shaheed, A. B. Siddique, A. K. Singh, K. P. Singh, R. N. Singh, and S. P. Singh. 2004. Helminthosporium leaf blight resistance and agronomic performance of wheat genotypes across warm regions of South Asia. Plant Breeding 123: 520—524.

  • Sharma, R.C., E. Duveiller, S. Gyawali, S.M. Shrestha, N.K. Chaudhary, and M.R. Bhatta. 2004. Resistance to Helminthosporium leaf blight and agronomic performance of spring wheat genotypes of diverse origins. Euphytica 139: 33–44,

  • López A. F., V. Cravero, P. Asprelli, T. Firpo, S. M. García, and E. Cointry. 2004.  Heterotic patterns in hybrids involving cultivar-groups of summer squash, Cucurbita pepo L. Euphytica 135: 355-360

  • J. Rubio; J.I. Cubero; L.M. Martín; M.J. Suso; F. Flores. 2004.  Biplot analysis of trait relations of white lupin in Spain. Euphytica 135, Issue 2 : 217-224.

  • 镉铬铅胁迫对植物萌芽影响的研究--双标图分析在生态毒理试验研究中的应用. 杨锦忠, 郝建平, 冯两蕊.. JOURNAL OF PINGDINGSHAN TEACHERS COLLEGE. 2004 Vol.19 No.5 P.1-4.

  • M.S. Kang: 2004. Plant Breeding: genotype-by-environment interaction, in Encyclopedia of Plant and Crop Science, Marcel Dekker, Inc.

  • W. Li, G. Sun, J. Liu, P. Masilamany, J. H. Taylor, W. Yan, K. J. Kasha, and K. P. Pauls. 2004. Inheritance of plant regeneration from maize (Zea mays L.) shoot meristem cultures derived from germinated seeds and the identification of associated RAPD and SSR markers. TAG: 108(4): 681-687.

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